I made a rig with 28BYJ-48's a year or two ago, and found much conflicting info about them online. Even a reliable source of info like Adafruit had specs that didn't match what I was observing with the particular motors I bought.
After much experimentation and high school level math, I concluded that the number of steps needed for turning 360 degrees wasn't an integer. Checking my old properties text file shows I settled on 2037.8864 steps per rev. I had 1000 for max motor speed and 800 for acceleration, and a multiplier of 2, so we're very close on that account. I believe I used an old v1 motor shield as well.
I wouldn't bet my house on that non-integer number, but give it a try. I think the machine was drawing reasonably well, but I don't remember doing a plot as demanding as a 24-hour Death-to-Sharpie marathon with it.
It was the output shaft and final gear that you glued?
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