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Community maintained workflows & tools (with examples)
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Reproducible Analyses for Bioinformatics - Java
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LaTeX cwl files for Sublime Text 2/3 with LaTeXing
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MGI's CWL Cancer Pipelines.
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The MG-RAST pipeline
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Toolbox for OCR post-correction
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CWL tools and workflows for GGR
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NCBI Prokaryotic Genome Annotation Pipeline
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H3ABioNet 16S rDNA diverstity analysis package
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Common Workflow Language tools and workflows by Pitagora-Network
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A community menagarie of automated variant validations using bcbio and the Common Workflow Language
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Docker for 4DN Hi-C processing pipeline
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CWL for GDC DNASeq workflows
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Roslin is a portable and reproducible workflow infrastructure for Cancer Genomic Sequencing Analysis
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This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts
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Test workflows, run scripts and data for bcbio Common Workflow Language integration
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Pipelines developed and used by 4DN-DCIC in Common Workflow Language
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This is a tutorial for Common Workflow Language (CWL)
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cwl workflows and tools for BioWardrobe project
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a place for topmed workflows
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cwl workflows and tools for BioWardrobe project
